Transcript: lnc-C8orf48-9:1

Basic information

LNCipedia transcript ID: lnc-C8orf48-9:1 
LNCipedia gene ID: lnc-C8orf48-9
Location (hg38): chr8:12958387-12962200
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1418 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT125189
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.4918 non-coding 
CPAT coding probability 24.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C8orf48-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC130352.1-6:1
4.0 lnc-AC130352.1-6:1
4.1 lnc-AC130352.1-6:1
5.0 lnc-AC130352.1-6:1
5.1 lnc-PCM1-43:1
5.2 lnc-C8orf48-9:1