Transcript: lnc-ACBD6-2:1

Basic information

LNCipedia transcript ID: lnc-ACBD6-2:1 
LNCipedia gene ID: lnc-ACBD6-2
Location (hg38): chr1:180180955-180198032
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2343 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500066
Alternative gene names: ENSG00000247866


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.5762 non-coding 
CPAT coding probability 37.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ACBD6-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACBD6-1:1
3.1 lnc-ACBD6-2:1
4.0 lnc-ACBD6-2:1
4.1 lnc-ACBD6-2:1
5.0 lnc-ACBD6-2:1
5.1 lnc-SH2D1B-189:1
5.2 lnc-ACBD6-2:1