Transcript: lnc-ADAM8-5:1

Basic information

LNCipedia transcript ID: lnc-ADAM8-5:1 
LNCipedia gene ID: lnc-ADAM8-5
Ensembl Gene ID: ENSG00000273980
Ensembl Transcript ID: ENST00000611956
Location (hg38): chr10:133257144-133257551
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 408 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611956.1
Alternative gene names: ENSG00000273980.1; RP13-49I15.6; AL592071.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.0163 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ADAM8-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ADAM8-5:1
4.1 lnc-ADAM8-5:1
5.0 lnc-ADAM8-5:1
5.1 lnc-CALY-7:1
5.2 lnc-ADAM8-5:1