Transcript: lnc-IRF4-18:2

Basic information

LNCipedia transcript ID: lnc-IRF4-18:2 
LNCipedia gene ID: lnc-IRF4-18
Location (hg38): chr6:837734-841881
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2776 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT106241
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.162 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF4-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL033381.1-18:2
4.0 lnc-AL033381.1-18:2
4.1 lnc-AL033381.1-18:2
5.0 lnc-AL033381.1-18:2
5.1 lnc-RIPK1-134:2
5.2 lnc-IRF4-18:2