Transcript: lnc-TDRD3-19:1

Basic information

LNCipedia transcript ID: lnc-TDRD3-19:1 
LNCipedia gene ID: lnc-TDRD3-19
Location (hg38): chr13:65995553-66090246
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1288 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034202; FPKM1_group_8059_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.6803 non-coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TDRD3-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL445989.1-11:3
4.0 lnc-AL445989.1-11:3
4.1 lnc-AL445989.1-11:3
5.0 lnc-AL445989.1-11:3
5.1 lnc-KL-281:1
5.2 lnc-TDRD3-19:1