Transcript: lnc-BRF1-5:1

Basic information

LNCipedia transcript ID: lnc-BRF1-5:1 
LNCipedia gene ID: lnc-BRF1-5
Location (hg38): chr14:105703964-105704602
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 359 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000497872; ENST00000497872.2; AL928768.3-001; OTTHUMT00000380303.1
Alternative gene names: ENSG00000253701; AL928768.3; ENSG00000253701.1; OTTHUMG00000164793.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 382.6353 coding 
CPAT coding probability 87.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-BRF1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL901608.1-1:1
3.1 lnc-AL901608.1-1:1
4.0 lnc-AL901608.1-1:1
4.1 lnc-AL901608.1-1:1
5.0 lnc-AL901608.1-1:1
5.1 lnc-AKT1-30:1
5.2 lnc-BRF1-5:1