Transcript: lnc-ANKRD27-2:2

Basic information

LNCipedia transcript ID: lnc-ANKRD27-2:2 
LNCipedia gene ID: lnc-ANKRD27-2
Location (hg38): chr19:32390050-32405402
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 885 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027727; NONHSAT064191
Alternative gene names: XLOC_013300; linc-TSHZ3-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.3644 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ANKRD27-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD27-2:2
3.1 lnc-ANKRD27-2:2
4.0 lnc-ANKRD27-2:2
4.1 lnc-ANKRD27-2:2
5.0 lnc-ANKRD27-2:2
5.1 lnc-SCGB2B2-96:13
5.2 lnc-ANKRD27-2:2