Transcript: lnc-APBB1IP-1:18

Basic information

LNCipedia transcript ID: lnc-APBB1IP-1:18 
LNCipedia gene ID: lnc-APBB1IP-1
Location (hg38): chr10:26649557-26653170
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 381 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000612040.1
Alternative gene names: ENSG00000231976.7; LINC00202-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.1587 non-coding 
CPAT coding probability 21.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-APBB1IP-1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-APBB1IP-1:18
4.1 lnc-APBB1IP-1:18
5.0 lnc-APBB1IP-1:18
5.1 lnc-NPY4R2-256:24
5.2 lnc-APBB1IP-1:18