Transcript: lnc-ARHGAP10-2:1

Basic information

LNCipedia transcript ID: lnc-ARHGAP10-2:1 
LNCipedia gene ID: lnc-ARHGAP10-2
Location (hg38): chr4:148692999-148700161
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 297 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008286; NONHSAT098700
Alternative gene names: XLOC_003729; linc-DCLK2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -220.5737 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARHGAP10-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGAP10-1:1
3.1 lnc-ARHGAP10-2:1
4.0 lnc-ARHGAP10-2:1
4.1 lnc-ARHGAP10-2:1
5.0 lnc-ARHGAP10-2:1
5.1 lnc-C4orf51-29:1
5.2 lnc-ARHGAP10-2:1