Transcript: lnc-ARID2-8:2

Basic information

LNCipedia transcript ID: lnc-ARID2-8:2 
LNCipedia gene ID: lnc-ARID2-8
Location (hg38): chr12:46274390-46278226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3454 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027852; FPKM1_group_6117_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.7525 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARID2-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARID2-8:2
4.0 lnc-ARID2-8:2
4.1 lnc-ARID2-8:2
5.0 lnc-ARID2-8:2
5.1 lnc-PCED1B-20:2
5.2 lnc-ARID2-8:2