Transcript: lnc-ARRB1-1:2

Basic information

LNCipedia transcript ID: lnc-ARRB1-1:2 
LNCipedia gene ID: lnc-ARRB1-1
Ensembl Gene ID: ENSG00000255136
Ensembl Transcript ID: ENST00000529491
Location (hg38): chr11:75210849-75215485
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529491.1; CTD-2562J17.4-002; OTTHUMT00000384087.1; NONHSAT023086
Alternative gene names: ENSG00000255136.1; CTD-2562J17.4; OTTHUMG00000165439.1; ENSG00000255136.2; AP001972.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.6059 non-coding 
CPAT coding probability 5.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRB1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRB1-1:2
4.0 lnc-ARRB1-1:2
4.1 lnc-ARRB1-1:2
5.0 lnc-ARRB1-1:2
5.1 lnc-WNT11-35:11
5.2 lnc-ARRB1-1:2