Transcript: lnc-ARRDC3-7:1

Basic information

LNCipedia transcript ID: lnc-ARRDC3-7:1 
LNCipedia gene ID: lnc-ARRDC3-7
Location (hg38): chr5:91415725-91416013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 289 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_4887_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.8458 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ARRDC3-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARRDC3-7:1
4.0 lnc-ARRDC3-7:1
4.1 lnc-ARRDC3-7:1
5.0 lnc-ARRDC3-7:1
5.1 lnc-ANKRD34B-175:1
5.2 lnc-ARRDC3-7:1