Transcript: lnc-ATIC-3:2

Basic information

LNCipedia transcript ID: lnc-ATIC-3:2 
LNCipedia gene ID: lnc-ATIC-3
Location (hg38): chr2:215461885-215463821
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 720 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005009; NONHSAT076758
Alternative gene names: XLOC_001846; linc-TMEM169-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -155.5901 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATIC-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATIC-2:2
3.1 lnc-ATIC-3:2
4.0 lnc-ATIC-3:2
4.1 lnc-ATIC-3:2
5.0 lnc-ATIC-3:2
5.1 lnc-TMEM169-24:4
5.2 lnc-ATIC-3:2