Transcript: lnc-ATP13A4-5:3

Basic information

LNCipedia transcript ID: lnc-ATP13A4-5:3 
LNCipedia gene ID: lnc-ATP13A4-5
Location (hg38): chr3:193578812-193579413
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 602 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT094012
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.8568 non-coding 
CPAT coding probability 3.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ATP13A4-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP13A4-5:3
4.0 lnc-ATP13A4-5:3
4.1 lnc-ATP13A4-5:3
5.0 lnc-ATP13A4-5:3
5.1 lnc-LRRC15-11:3
5.2 lnc-ATP13A4-5:3