Transcript: LINC01762:48

Basic information

LNCipedia transcript ID: LINC01762:48 
LNCipedia gene ID: LINC01762
Location (hg38): chr1:116455034-116461705
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 204 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT005443
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -199.0935 non-coding 
CPAT coding probability 3.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01762:48 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP1A1OS-2:11
4.0 lnc-ATP1A1OS-2:11
4.1 lnc-ATP1A1OS-2:11
5.0 lnc-ATP1A1OS-2:11
5.1 LINC01762:24
5.2 LINC01762:48