Transcript: lnc-DDIAS-3:4

Basic information

LNCipedia transcript ID: lnc-DDIAS-3:4 
LNCipedia gene ID: lnc-DDIAS-3
Ensembl Gene ID: ENSG00000254511
Ensembl Transcript ID: ENST00000526154
Location (hg38): chr11:81970994-81987813
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 342 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000526154; ENST00000526154.1; RP11-876F14.1-001; OTTHUMT00000391624.1; NONHSAT023340
Alternative gene names: ENSG00000254511; RP11-876F14.1; ENSG00000254511.1; OTTHUMG00000166868.1; AP002802.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.9953 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DDIAS-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C11orf82-1:2
3.1 lnc-C11orf82-3:2
4.0 lnc-C11orf82-3:2
4.1 lnc-C11orf82-3:2
5.0 lnc-C11orf82-3:2
5.1 lnc-DDIAS-14:3
5.2 lnc-DDIAS-3:4