Transcript: lnc-SMIM12-2:1

Basic information

LNCipedia transcript ID: lnc-SMIM12-2:1 
LNCipedia gene ID: lnc-SMIM12-2
Location (hg38): chr1:34710043-34718459
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 475 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT002313
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -132.8164 non-coding 
CPAT coding probability 8.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMIM12-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf212-2:1
4.0 lnc-C1orf212-2:1
4.1 lnc-C1orf212-2:1
5.0 lnc-C1orf212-2:1
5.1 lnc-COL8A2-50:1
5.2 lnc-SMIM12-2:1