Transcript: MIR646HG:36

Basic information

LNCipedia transcript ID: MIR646HG:36 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60377103-60382837
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4316 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT080661; FPKM1_group_19748_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 14.2803 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf197-7:1
4.0 lnc-C20orf197-7:1
4.1 MIR646HG:36
5.0 MIR646HG:36
5.1 MIR646HG:36
5.2 MIR646HG:36