Transcript: lnc-C20orf85-3:1

Basic information

LNCipedia transcript ID: lnc-C20orf85-3:1 
LNCipedia gene ID: lnc-C20orf85-3
Location (hg38): chr20:58231267-58232896
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 887 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080535
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.1801 non-coding 
CPAT coding probability 3.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C20orf85-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C20orf85-3:1
4.0 lnc-C20orf85-3:1
4.1 lnc-C20orf85-3:1
5.0 lnc-C20orf85-3:1
5.1 lnc-STX16-12:1
5.2 lnc-C20orf85-3:1