Transcript: lnc-C2CD4B-3:1

Basic information

LNCipedia transcript ID: lnc-C2CD4B-3:1 
LNCipedia gene ID: lnc-C2CD4B-3
Location (hg38): chr15:62209924-62211058
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1039 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024132; NONHSAT044282
Alternative gene names: XLOC_011494; linc-C2CD4B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.5501 non-coding 
CPAT coding probability 11.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-C2CD4B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C2CD4B-3:1
3.1 lnc-C2CD4B-3:1
4.0 lnc-C2CD4B-3:1
4.1 lnc-C2CD4B-3:1
5.0 lnc-C2CD4B-3:1
5.1 lnc-ICE2-46:1
5.2 lnc-C2CD4B-3:1