Transcript: lnc-LURAP1L-4:3

Basic information

LNCipedia transcript ID: lnc-LURAP1L-4:3 
LNCipedia gene ID: lnc-LURAP1L-4
Location (hg38): chr9:13446526-13487511
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 477 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000428006; ENST00000428006.1; RP11-536O18.1-001; OTTHUMT00000051737.1
Alternative gene names: ENSG00000226197; RP11-536O18.1; ENSG00000226197.1; OTTHUMG00000019563.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.7863 non-coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LURAP1L-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C9orf146-2:1
3.1 lnc-C9orf146-3:1
4.0 lnc-C9orf146-3:1
4.1 lnc-C9orf146-3:1
5.0 lnc-C9orf146-3:1
5.1 lnc-RECK-205:3
5.2 lnc-LURAP1L-4:3