Transcript: lnc-CBR1-8:1

Basic information

LNCipedia transcript ID: lnc-CBR1-8:1 
LNCipedia gene ID: lnc-CBR1-8
Location (hg38): chr21:35996312-35997066
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 755 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr21_1042_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.5906 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBR1-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBR1-8:1
4.0 lnc-CBR1-8:1
4.1 lnc-CBR1-8:1
5.0 lnc-CBR1-8:1
5.1 lnc-SIM2-34:1
5.2 lnc-CBR1-8:1