Transcript: lnc-CCDC144A-5:1

Basic information

LNCipedia transcript ID: lnc-CCDC144A-5:1 
LNCipedia gene ID: lnc-CCDC144A-5
Location (hg38): chr17:16594645-16596633
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 989 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1410_chr17:16497958-16499947_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.7624 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC144A-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC144A-5:1
4.0 lnc-CCDC144A-5:1
4.1 lnc-CCDC144A-5:1
5.0 lnc-CCDC144A-5:1
5.1 lnc-GLP2R-82:1
5.2 lnc-CCDC144A-5:1