Transcript: lnc-CFAP100-9:2

Basic information

LNCipedia transcript ID: lnc-CFAP100-9:2 
LNCipedia gene ID: lnc-CFAP100-9
Location (hg38): chr3:126321846-126322586
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 429 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT091674
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.0574 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CFAP100-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC37-9:1
4.0 lnc-CCDC37-9:1
4.1 lnc-CCDC37-9:1
5.0 lnc-CCDC37-9:1
5.1 lnc-CFAP100-9:1
5.2 lnc-CFAP100-9:2