Transcript: lnc-CCDC96-2:2

Basic information

LNCipedia transcript ID: lnc-CCDC96-2:2 
LNCipedia gene ID: lnc-CCDC96-2
Location (hg38): chr4:6985971-6987031
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1061 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1059:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -25.5638 non-coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC96-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CCDC96-2:2
4.1 lnc-CCDC96-2:2
5.0 lnc-CCDC96-2:2
5.1 lnc-PSAPL1-8:2
5.2 lnc-CCDC96-2:2