Transcript: lnc-CCT4-2:1

Basic information

LNCipedia transcript ID: lnc-CCT4-2:1 
LNCipedia gene ID: lnc-CCT4-2
Location (hg38): chr2:61966400-62376275
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2328 bp
Exons: 4
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000506268
Alternative gene names: ENSG00000250876


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.7562 non-coding 
CPAT coding probability 4.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCT4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCT4-1:1
3.1 lnc-CCT4-2:1
4.0 lnc-CCT4-2:1
4.1 lnc-CCT4-2:1
5.0 lnc-CCT4-2:1
5.1 lnc-PPP4R3B-105:1
5.2 lnc-CCT4-2:1