Transcript: lnc-CEP72-2:2

Basic information

LNCipedia transcript ID: lnc-CEP72-2:2 
LNCipedia gene ID: lnc-CEP72-2
Location (hg38): chr5:675590-676857
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1268 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1770:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 40.1358 non-coding 
CPAT coding probability 8.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CEP72-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CEP72-2:2
4.1 lnc-CEP72-2:2
5.0 lnc-CEP72-2:2
5.1 lnc-CARD6-390:1
5.2 lnc-CEP72-2:2