Transcript: lnc-CHD2-4:13

Basic information

LNCipedia transcript ID: lnc-CHD2-4:13 
LNCipedia gene ID: lnc-CHD2-4
Location (hg38): chr15:93127182-93308864
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5865 bp
Exons: 15
Sources: Nielsen et al.,2014
Alternative transcript names: l_1227_chr15:93670410-93703781_adipose
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.9648 non-coding 
CPAT coding probability 12.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHD2-4:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHD2-3:2
4.0 lnc-CHD2-3:2
4.1 lnc-CHD2-4:13
5.0 lnc-CHD2-4:13
5.1 lnc-TTLL13P-78:1
5.2 lnc-CHD2-4:13