Transcript: LINC02180:14

Basic information

LNCipedia transcript ID: LINC02180:14 
LNCipedia gene ID: LINC02180
Location (hg38): chr16:52078637-52099068
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 916 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024406; NONHSAT142499
Alternative gene names: XLOC_011723; linc-CHD9-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.0547 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02180:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHD9-5:1
3.1 lnc-CHD9-7:2
4.0 lnc-CHD9-7:2
4.1 lnc-CHD9-7:2
5.0 lnc-CHD9-7:2
5.1 LINC02180:4
5.2 LINC02180:14