Transcript: LINC02180:19

Basic information

LNCipedia transcript ID: LINC02180:19 
LNCipedia gene ID: LINC02180
Location (hg38): chr16:52085282-52099068
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1085 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024409; NONHSAT142507
Alternative gene names: XLOC_011723; linc-CHD9-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.0547 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02180:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHD9-5:4
3.1 lnc-CHD9-7:6
4.0 lnc-CHD9-7:6
4.1 lnc-CHD9-7:6
5.0 lnc-CHD9-7:6
5.1 LINC02180:9
5.2 LINC02180:19