Transcript: ERICD:6

Basic information

LNCipedia transcript ID: ERICD:6 
LNCipedia gene ID: ERICD
Location (hg38): chr8:140636144-140638432
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1745 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014875; NONHSAT129383
Alternative gene names: XLOC_006942; linc-DENND3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.058 non-coding 
CPAT coding probability 17.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ERICD:6 no no no no

Available literature

  1. Feldstein (2013), The long non-coding RNA ERIC is regulated by E2F and modulates the cellular response to DNA damage., Mol. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHRAC1-2:1
3.1 lnc-CHRAC1-2:1
4.0 lnc-CHRAC1-2:1
4.1 lnc-CHRAC1-2:1
5.0 lnc-CHRAC1-2:1
5.1 ERICD:3
5.2 ERICD:6