Transcript: lnc-CHST11-2:1

Basic information

LNCipedia transcript ID: lnc-CHST11-2:1 
LNCipedia gene ID: lnc-CHST11-2
Location (hg38): chr12:104772548-104776911
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1022 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_719_chr12:105166325-105170689_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.3286 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CHST11-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHST11-2:1
4.0 lnc-CHST11-2:1
4.1 lnc-CHST11-2:1
5.0 lnc-CHST11-2:1
5.1 lnc-CHST11-2:1
5.2 lnc-CHST11-2:1