Transcript: lnc-CINP-1:1

Basic information

LNCipedia transcript ID: lnc-CINP-1:1 
LNCipedia gene ID: lnc-CINP-1
Location (hg38): chr14:102256975-102258781
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1557 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc001ymn_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7563 non-coding 
CPAT coding probability 42.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CINP-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CINP-1:1
4.0 lnc-CINP-1:1
4.1 lnc-CINP-1:1
5.0 lnc-CINP-1:1
5.1 lnc-HSP90AA1-18:1
5.2 lnc-CINP-1:1