Transcript: lnc-CLASP2-1:2

Basic information

LNCipedia transcript ID: lnc-CLASP2-1:2 
LNCipedia gene ID: lnc-CLASP2-1
Location (hg38): chr3:33797188-33799063
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1876 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT088941
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.0826 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLASP2-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLASP2-1:2
4.0 lnc-CLASP2-1:2
4.1 lnc-CLASP2-1:2
5.0 lnc-CLASP2-1:2
5.1 lnc-OSBPL10-30:1
5.2 lnc-CLASP2-1:2