Transcript: lnc-ZFHX3-27:13

Basic information

LNCipedia transcript ID: lnc-ZFHX3-27:13 
LNCipedia gene ID: lnc-ZFHX3-27
Location (hg38): chr16:74192405-74210505
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 783 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00025050
Alternative gene names: XLOC_012007; linc-ZFHX3-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.8679 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZFHX3-27:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLEC18B-2:5
3.1 lnc-CLEC18B-3:7
4.0 lnc-CLEC18B-3:7
4.1 lnc-CLEC18B-3:7
5.0 lnc-CLEC18B-3:7
5.1 lnc-MLKL-27:13
5.2 lnc-ZFHX3-27:13