Transcript: lnc-CLIC5-1:5

Basic information

LNCipedia transcript ID: lnc-CLIC5-1:5 
LNCipedia gene ID: lnc-CLIC5-1
Ensembl Gene ID: ENSG00000231769
Ensembl Transcript ID: ENST00000444038
Location (hg38): chr6:46097093-46129591
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 462 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444038.2
Alternative gene names: ENSG00000231769.2; RP1-8B1.4; AL035701.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.0756 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CLIC5-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLIC5-1:5
4.0 lnc-CLIC5-1:5
4.1 lnc-CLIC5-1:5
5.0 lnc-CLIC5-1:5
5.1 lnc-NFKBIE-43:10
5.2 lnc-CLIC5-1:5