Transcript: lnc-CMPK2-12:1

Basic information

LNCipedia transcript ID: lnc-CMPK2-12:1 
LNCipedia gene ID: lnc-CMPK2-12
Location (hg38): chr2:5708239-5719733
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 288 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004111; NONHSAT068817
Alternative gene names: XLOC_001959; linc-RNASEH1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -202.4288 non-coding 
CPAT coding probability 1.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CMPK2-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CMPK2-11:1
3.1 lnc-CMPK2-12:1
4.0 lnc-CMPK2-12:1
4.1 lnc-CMPK2-12:1
5.0 lnc-CMPK2-12:1
5.1 lnc-RAD51AP2-164:1
5.2 lnc-CMPK2-12:1