Transcript: lnc-COX10-6:2

Basic information

LNCipedia transcript ID: lnc-COX10-6:2 
LNCipedia gene ID: lnc-COX10-6
Location (hg38): chr17:13619729-13627641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 614 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025843; NONHSAT145726
Alternative gene names: XLOC_012114; linc-COX10


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.4122 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX10-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COX10-3:3
3.1 lnc-COX10-6:2
4.0 lnc-COX10-6:2
4.1 lnc-COX10-6:2
5.0 lnc-COX10-6:2
5.1 lnc-GLP2R-28:4
5.2 lnc-COX10-6:2