Transcript: lnc-COX10-6:4

Basic information

LNCipedia transcript ID: lnc-COX10-6:4 
LNCipedia gene ID: lnc-COX10-6
Location (hg38): chr17:13619728-13627641
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 647 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT145723; FPKM1_group_12334_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.4122 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-COX10-6:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COX10-6:4
4.0 lnc-COX10-6:4
4.1 lnc-COX10-6:4
5.0 lnc-COX10-6:4
5.1 lnc-GLP2R-28:1
5.2 lnc-COX10-6:4