Transcript: RRS1-AS1:12

Basic information

LNCipedia transcript ID: RRS1-AS1:12 
LNCipedia gene ID: RRS1-AS1
Location (hg38): chr8:66200451-66209713
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 674 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015030; NONHSAT127017
Alternative gene names: XLOC_007109; linc-CRH-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.2522 non-coding 
CPAT coding probability 0.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RRS1-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CRH-2:1
3.1 lnc-CRH-2:1
4.0 lnc-CRH-2:1
4.1 RRS1-AS1:12
5.0 RRS1-AS1:12
5.1 RRS1-AS1:12
5.2 RRS1-AS1:12