Transcript: lnc-CRYAA-15:1

Basic information

LNCipedia transcript ID: lnc-CRYAA-15:1 
LNCipedia gene ID: lnc-CRYAA-15
Location (hg38): chr21:43299653-43302971
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1897 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2225_chr21:44719532-44722851_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.6962 non-coding 
CPAT coding probability 18.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CRYAA-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CRYAA-15:1
4.0 lnc-CRYAA-15:1
4.1 lnc-CRYAA-15:1
5.0 lnc-CRYAA-15:1
5.1 lnc-RRP1-22:1
5.2 lnc-CRYAA-15:1