Transcript: lnc-ERICH1-21:1

Basic information

LNCipedia transcript ID: lnc-ERICH1-21:1 
LNCipedia gene ID: lnc-ERICH1-21
Location (hg38): chr8:1792902-1795956
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2827 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014909; NONHSAT124685
Alternative gene names: XLOC_006976; linc-ERICH1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.5467 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CSMD1-8:1
3.1 lnc-CSMD1-9:1
4.0 lnc-CSMD1-9:1
4.1 lnc-CSMD1-9:1
5.0 lnc-CSMD1-9:1
5.1 lnc-DEFA1B-71:1
5.2 lnc-ERICH1-21:1