Transcript: lnc-CTH-11:1

Basic information

LNCipedia transcript ID: lnc-CTH-11:1 
LNCipedia gene ID: lnc-CTH-11
Location (hg38): chr1:70476258-70558418
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 900 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_70_chr1:70941940-70999544_kidney
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.9446 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CTH-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTH-11:1
4.0 lnc-CTH-11:1
4.1 lnc-CTH-11:1
5.0 lnc-CTH-11:1
5.1 lnc-CTH-11:1
5.2 lnc-CTH-11:1