Transcript: lnc-DAAM2-1:1

Basic information

LNCipedia transcript ID: lnc-DAAM2-1:1 
LNCipedia gene ID: lnc-DAAM2-1
Location (hg38): chr6:39948385-39953232
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 304 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011810; NONHSAT112444
Alternative gene names: XLOC_005283; linc-TSPO2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -231.0027 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DAAM2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DAAM2-1:1
3.1 lnc-DAAM2-1:1
4.0 lnc-DAAM2-1:1
4.1 lnc-DAAM2-1:1
5.0 lnc-DAAM2-1:1
5.1 lnc-TREML4-25:2
5.2 lnc-DAAM2-1:1