Transcript: lnc-DCT-16:2

Basic information

LNCipedia transcript ID: lnc-DCT-16:2 
LNCipedia gene ID: lnc-DCT-16
Ensembl Gene ID: ENSG00000278177
Ensembl Transcript ID: ENST00000610286
Location (hg38): chr13:93226612-93227317
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 706 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000610286.1
Alternative gene names: ENSG00000278177.1; RP11-632L2.2; AL354811.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.7665 non-coding 
CPAT coding probability 54.89% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DCT-16:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DCT-16:2
4.1 lnc-DCT-16:2
5.0 lnc-DCT-16:2
5.1 lnc-IRS2-97:1
5.2 lnc-DCT-16:2