Transcript: lnc-DENND3-3:1

Basic information

LNCipedia transcript ID: lnc-DENND3-3:1 
LNCipedia gene ID: lnc-DENND3-3
Location (hg38): chr8:141084016-141085548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1533 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT129399; FPKM1_group_32426_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.9697 non-coding 
CPAT coding probability 2.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DENND3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DENND3-3:1
4.0 lnc-DENND3-3:1
4.1 lnc-DENND3-3:1
5.0 lnc-DENND3-3:1
5.1 lnc-GPT-97:1
5.2 lnc-DENND3-3:1