Transcript: LINC02081:24

Basic information

LNCipedia transcript ID: LINC02081:24 
LNCipedia gene ID: LINC02081
RefSeq ID: NR_110848
Location (hg38): chr17:78617384-78632057
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2261 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110848; NR_110848.1
Alternative gene names: LOC101928710


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.6325 non-coding 
CPAT coding probability 48.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02081:24 no no no no

Available literature

  1. Fu (2017), Deregulated lncRNAs in B Cells from Patients with Active Tuberculosis., PLoS ONE
  2. Fan (2016), Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer., Med. Sci. Monit.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAH17-1:7
4.0 lnc-DNAH17-1:7
4.1 lnc-DNAH17-1:7
5.0 lnc-DNAH17-1:7
5.1 LINC02081:10
5.2 LINC02081:24

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