Transcript: lnc-DYSF-2:1

Basic information

LNCipedia transcript ID: lnc-DYSF-2:1 
LNCipedia gene ID: lnc-DYSF-2
Location (hg38): chr2:71373938-71375532
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 827 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000434786.1; ZNF638-IT1-001; OTTHUMT00000327430.1
Alternative gene names: ENSG00000237779.1; ZNF638-IT1; OTTHUMG00000152698.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -5.5498 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DYSF-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DYSF-2:1
4.0 lnc-DYSF-2:1
4.1 lnc-DYSF-2:1
5.0 lnc-DYSF-2:1
5.1 lnc-POLE4-88:1
5.2 lnc-DYSF-2:1