Transcript: lnc-CRACR2A-1:1

Basic information

LNCipedia transcript ID: lnc-CRACR2A-1:1 
LNCipedia gene ID: lnc-CRACR2A-1
RefSeq ID: NR_126055
Location (hg38): chr12:3483712-3492819
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5979 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126055; NR_126055.1
Alternative gene names: THCAT155


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -90.1024 non-coding 
CPAT coding probability 72.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CRACR2A-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EFCAB4B-1:3
4.0 lnc-EFCAB4B-1:3
4.1 lnc-EFCAB4B-1:3
5.0 lnc-EFCAB4B-1:3
5.1 lnc-CHD4-87:1
5.2 lnc-CRACR2A-1:1