Transcript: lnc-ELMOD3-1:1

Basic information

LNCipedia transcript ID: lnc-ELMOD3-1:1 
LNCipedia gene ID: lnc-ELMOD3-1
Location (hg38): chr2:85287638-85292444
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4470 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000502432; NONHSAT071979
Alternative gene names: ENSG00000250117; AC093162.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.3693 non-coding 
CPAT coding probability 9.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELMOD3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ELMOD3-1:1
3.1 lnc-ELMOD3-1:1
4.0 lnc-ELMOD3-1:1
4.1 lnc-ELMOD3-1:1
5.0 lnc-ELMOD3-1:1
5.1 lnc-POLE4-170:1
5.2 lnc-ELMOD3-1:1